PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010522181.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family DBB
Protein Properties Length: 243aa    MW: 27028.1 Da    PI: 5.1406
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010522181.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.32.7e-07444539
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
                     C+ +e+ +++  C  ++  lC++C +e H        H++
  XP_010522181.1  4 QCDVCERAPATVICCADEAALCPKCDVEVHAAnklaskHQR 44
                    7*****************************65667777765 PP

2zf-B_box29.41.6e-095594437
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                    + C+ ++ek + +fC +++ llC+dC +++H        H
  XP_010522181.1 55 PPCDICQEKAAFIFCVEDRALLCRDCDEAIHAAntlsanH 94
                    68*****************************654555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.129147IPR000315B-box-type zinc finger
CDDcd000216.67E-6347No hitNo description
SMARTSM003361.5E-8447IPR000315B-box-type zinc finger
PfamPF006431.4E-5444IPR000315B-box-type zinc finger
SMARTSM003362.9E-165299IPR000315B-box-type zinc finger
PROSITE profilePS501199.6415299IPR000315B-box-type zinc finger
CDDcd000218.93E-85598No hitNo description
PfamPF006433.2E-75595IPR000315B-box-type zinc finger
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MKIQCDVCER APATVICCAD EAALCPKCDV EVHAANKLAS KHQRLLLNSL SXKFPPCDIC  60
QEKAAFIFCV EDRALLCRDC DEAIHAANTL SANHQRFLAT GIRVALSSST CNKEVQKNQS  120
EPSNQQSAGH LPTQQSSNSP PLWPVDDFFH FSGLESCDKQ KGQMDDIGEL EWLADVGLFG  180
DQLHHHHEEE EALPAAEVPQ LPVSQLNHIH SYRPIKSNVS YKKPRLEIQD HDDEEHSIVP  240
DLG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010522181.11e-179PREDICTED: LOW QUALITY PROTEIN: B-box zinc finger protein 24
SwissprotQ962881e-122BBX24_ARATH; B-box zinc finger protein 24
TrEMBLG9HRU71e-124G9HRU7_BRANA; BnaC08g01640D protein
STRINGBra030635.1-P1e-120(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM27112767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06040.11e-112DBB family protein